 Escherichia coli
"Escherichia coli" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus,
MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure,
which enables searching at various levels of specificity.
A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc.
| Descriptor ID |
D004926
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| MeSH Number(s) |
B03.440.450.425.325.300 B03.660.250.150.180.100
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| Concept/Terms |
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Below are MeSH descriptors whose meaning is more general than "Escherichia coli".
Below are MeSH descriptors whose meaning is more specific than "Escherichia coli".
This graph shows the total number of publications written about "Escherichia coli" by people in UAMS Profiles by year, and whether "Escherichia coli" was a major or minor topic of these publications.
To see the data from this visualization as text, click here.
| Year | Major Topic | Minor Topic | Total |
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| 2024 | 1 | 3 | 4 | | 2023 | 0 | 1 | 1 | | 2022 | 1 | 0 | 1 | | 2021 | 2 | 2 | 4 | | 2020 | 2 | 1 | 3 | | 2019 | 0 | 2 | 2 | | 2018 | 1 | 3 | 4 | | 2017 | 5 | 3 | 8 | | 2016 | 3 | 2 | 5 | | 2015 | 3 | 1 | 4 | | 2014 | 2 | 3 | 5 | | 2013 | 6 | 0 | 6 | | 2012 | 2 | 4 | 6 | | 2011 | 3 | 7 | 10 | | 2010 | 2 | 2 | 4 | | 2009 | 1 | 5 | 6 | | 2008 | 5 | 1 | 6 | | 2007 | 4 | 2 | 6 | | 2006 | 4 | 3 | 7 | | 2005 | 1 | 3 | 4 | | 2004 | 6 | 4 | 10 | | 2003 | 1 | 4 | 5 | | 2002 | 1 | 8 | 9 | | 2001 | 1 | 7 | 8 | | 2000 | 1 | 1 | 2 | | 1999 | 1 | 1 | 2 | | 1998 | 0 | 3 | 3 | | 1997 | 2 | 2 | 4 | | 1996 | 0 | 2 | 2 | | 1995 | 0 | 1 | 1 | | 1992 | 3 | 1 | 4 | | 1991 | 1 | 0 | 1 | | 1990 | 0 | 1 | 1 | | 1989 | 0 | 1 | 1 |
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Below are the most recent publications written about "Escherichia coli" by people in Profiles over the past ten years.
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Lei MG, Jorgenson MA, Robbs EJ, Black IM, Archer-Hartmann S, Shalygin S, Azadi P, Lee CY. Characterization of Ssc, an N-acetylgalactosamine-containing Staphylococcus aureus surface polysaccharide. J Bacteriol. 2024 05 23; 206(5):e0004824.
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Sen A, Masetty M, Weerakoon S, Morris C, Yadav JS, Apewokin S, Trannguyen J, Broom M, Priye A. Paper-based loop-mediated isothermal amplification and CRISPR integrated platform for on-site nucleic acid testing of pathogens. Biosens Bioelectron. 2024 Aug 01; 257:116292.
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Kay EJ, Dooda MK, Bryant JC, Reid AJ, Wren BW, Troutman JM, Jorgenson MA. Engineering Escherichia coli for increased Und-P availability leads to material improvements in glycan expression technology. Microb Cell Fact. 2024 Mar 01; 23(1):72.
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Joseph I, Risener CJ, Falk K, Northington G, Quave CL. Bacterial Persistence in Urinary Tract Infection Among Postmenopausal Population. Urogynecology (Phila). 2024 03 01; 30(3):205-213.
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Moon SH, Huang E. Cefiderocol Resistance in Klebsiella pneumoniae Is Linked to SHV Extended-Spectrum ?-Lactamase Activities and Functional Loss of the Outer Membrane Porin OmpK35. Microbiol Spectr. 2023 06 15; 11(3):e0349622.
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Khine NO, Wongsurawat T, Jenjaroenpun P, Hampson DJ, Prapasarakul N. Comparative genomic analysis of Colistin resistant Escherichia coli isolated from pigs, a human and wastewater on colistin withdrawn pig farm. Sci Rep. 2023 03 29; 13(1):5124.
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Boueroy P, Wongsurawat T, Jenjaroenpun P, Chopjitt P, Hatrongjit R, Jittapalapong S, Kerdsin A. Plasmidome in mcr-1 harboring carbapenem-resistant enterobacterales isolates from human in Thailand. Sci Rep. 2022 11 09; 12(1):19051.
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Lim TJY, Sargent R, Henry R, Fletcher TD, Coleman RA, McCarthy DT, Lintern A. Riparian buffers: Disrupting the transport of E. coli from rural catchments to streams. Water Res. 2022 Aug 15; 222:118897.
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Ekambaram M, Nabower A, Rajbhandari P, Eisenberg J, Goodrich N, Ampofo K, Gollehon NS, Martin KC, Lyden E, Snowden J. Evaluation of Discordant Results Between FilmArray Meningitis/Encephalitis Panel and Conventional Testing in Pediatric Patients: A Multisite Retrospective Cohort Study. J Pediatric Infect Dis Soc. 2022 Apr 30; 11(4):134-141.
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Moon SH, Kaufmann Y, Fujiwara R, Huang E. Enzymatically-crosslinked gelatin hydrogels containing paenipeptin and clarithromycin against carbapenem-resistant pathogen in murine skin wound infection. BMC Microbiol. 2021 11 24; 21(1):326.
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Reid AJ, Eade CR, Jones KJ, Jorgenson MA, Troutman JM. Tracking Colanic Acid Repeat Unit Formation from Stepwise Biosynthesis Inactivation in Escherichia coli. Biochemistry. 2021 07 13; 60(27):2221-2230.
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Abram K, Udaondo Z, Bleker C, Wanchai V, Wassenaar TM, Robeson MS, Ussery DW. Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups. Commun Biol. 2021 01 26; 4(1):117.
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Jenjaroenpun P, Wongsurawat T, Wadley TD, Wassenaar TM, Liu J, Dai Q, Wanchai V, Akel NS, Jamshidi-Parsian A, Franco AT, Boysen G, Jennings ML, Ussery DW, He C, Nookaew I. Decoding the epitranscriptional landscape from native RNA sequences. Nucleic Acids Res. 2021 01 25; 49(2):e7.
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Jorgenson MA, Bryant JC. A genetic screen to identify factors affected by undecaprenyl phosphate recycling uncovers novel connections to morphogenesis in Escherichia coli. Mol Microbiol. 2021 02; 115(2):191-207.
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Fritts RK, Bird JT, Behringer MG, Lipzen A, Martin J, Lynch M, McKinlay JB. Enhanced nutrient uptake is sufficient to drive emergent cross-feeding between bacteria in a synthetic community. ISME J. 2020 11; 14(11):2816-2828.
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Moon SH, Kaufmann Y, Huang E. Paenipeptin Analogues Potentiate Clarithromycin and Rifampin against mcr-1-Mediated Polymyxin-Resistant Escherichia coli In Vivo. Antimicrob Agents Chemother. 2020 03 24; 64(4).
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Ranjit DK, Liechti GW, Maurelli AT. Chlamydial MreB Directs Cell Division and Peptidoglycan Synthesis in Escherichia coli in the Absence of FtsZ Activity. mBio. 2020 02 18; 11(1).
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Li Q, Li Y, Min T, Gong J, Du L, Phillips DL, Liu J, Lam JWY, Sung HHY, Williams ID, Kwok RTK, Ho CL, Li K, Wang J, Tang BZ. Time-Dependent Photodynamic Therapy for Multiple Targets: A Highly Efficient AIE-Active Photosensitizer for Selective Bacterial Elimination and Cancer Cell Ablation. Angew Chem Int Ed Engl. 2020 06 08; 59(24):9470-9477.
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Furuya S, Cichocki JA, Konganti K, Dreval K, Uehara T, Katou Y, Fukushima H, Kono H, Pogribny IP, Argemi J, Bataller R, Rusyn I. Histopathological and Molecular Signatures of a Mouse Model of Acute-on-Chronic Alcoholic Liver Injury Demonstrate Concordance With Human Alcoholic Hepatitis. Toxicol Sci. 2019 08 01; 170(2):427-437.
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Jorgenson MA, MacCain WJ, Meberg BM, Kannan S, Bryant JC, Young KD. Simultaneously inhibiting undecaprenyl phosphate production and peptidoglycan synthases promotes rapid lysis in Escherichia coli. Mol Microbiol. 2019 07; 112(1):233-248.
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Rennella E, Morgan GJ, Kelly JW, Kay LE. Role of domain interactions in the aggregation of full-length immunoglobulin light chains. Proc Natl Acad Sci U S A. 2019 01 15; 116(3):854-863.
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Dix SR, Sun R, Harris MJ, Batters SL, Sedelnikova SE, Baker PJ, Thomas MS, Rice DW. TssA from Aeromonas hydrophila: expression, purification and crystallographic studies. Acta Crystallogr F Struct Biol Commun. 2018 Sep 01; 74(Pt 9):578-582.
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Owen HJ, Sun R, Ahmad A, Sedelnikova SE, Baker PJ, Thomas MS, Rice DW. TssA from Burkholderia cenocepacia: expression, purification, crystallization and crystallographic analysis. Acta Crystallogr F Struct Biol Commun. 2018 Sep 01; 74(Pt 9):536-542.
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MacCain WJ, Kannan S, Jameel DZ, Troutman JM, Young KD. A Defective Undecaprenyl Pyrophosphate Synthase Induces Growth and Morphological Defects That Are Suppressed by Mutations in the Isoprenoid Pathway of Escherichia coli. J Bacteriol. 2018 09 15; 200(18).
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Otter JA, Galletly TJ, Davies F, Hitchcock J, Gilchrist MJ, Dyakova E, Mookerjee S, Holmes AH, Brannigan ET. Planning to halve Gram-negative bloodstream infection: getting to grips with healthcare-associated Escherichia coli bloodstream infection sources. J Hosp Infect. 2019 Feb; 101(2):129-133.
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Jorgenson MA, Young KD. YtfB, an OapA Domain-Containing Protein, Is a New Cell Division Protein in Escherichia coli. J Bacteriol. 2018 07 01; 200(13).
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Gokulan K, Bekele AZ, Drake KL, Khare S. Responses of intestinal virome to silver nanoparticles: safety assessment by classical virology, whole-genome sequencing and bioinformatics approaches. Int J Nanomedicine. 2018; 13:2857-2867.
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Moseley MA, Hughes CJ, Juvvadi PR, Soderblom EJ, Lennon S, Perkins SR, Thompson JW, Steinbach WJ, Geromanos SJ, Wildgoose J, Langridge JI, Richardson K, Vissers JPC. Scanning Quadrupole Data-Independent Acquisition, Part A: Qualitative and Quantitative Characterization. J Proteome Res. 2018 02 02; 17(2):770-779.
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Kaldhone PR, Han J, Deck J, Khajanchi B, Nayak R, Foley SL, Ricke SC. Evaluation of the Genetics and Functionality of Plasmids in Incompatibility Group I1-Positive Salmonella enterica. Foodborne Pathog Dis. 2018 03; 15(3):168-176.
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Jorgenson MA. Bacterial Size: Tuning In to a Clearer Connection. Curr Biol. 2017 11 20; 27(22):R1216-R1218.
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Jun SR, Nookaew I, Hauser L, Gorin A. Assessment of genome annotation using gene function similarity within the gene neighborhood. BMC Bioinformatics. 2017 Jul 19; 18(1):345.
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Molina-Santiago C, Udaondo Z, Cordero BF, Ramos JL. Interspecies cross-talk between co-cultured Pseudomonas putida and Escherichia coli. Environ Microbiol Rep. 2017 08; 9(4):441-448.
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Al Faouri R, Henry R, Biris AS, Sleezer R, Salamo GJ. Adhesive force between graphene nanoscale flakes and living biological cells. J Appl Toxicol. 2017 Nov; 37(11):1346-1353.
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Huang E, Yang X, Zhang L, Moon SH, Yousef AE. New Paenibacillus strain produces a family of linear and cyclic antimicrobial lipopeptides: cyclization is not essential for their antimicrobial activity. FEMS Microbiol Lett. 2017 04 01; 364(8).
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Satlin MJ, Chen L, Patel G, Gomez-Simmonds A, Weston G, Kim AC, Seo SK, Rosenthal ME, Sperber SJ, Jenkins SG, Hamula CL, Uhlemann AC, Levi MH, Fries BC, Tang YW, Juretschko S, Rojtman AD, Hong T, Mathema B, Jacobs MR, Walsh TJ, Bonomo RA, Kreiswirth BN. Multicenter Clinical and Molecular Epidemiological Analysis of Bacteremia Due to Carbapenem-Resistant Enterobacteriaceae (CRE) in the CRE Epicenter of the United States. Antimicrob Agents Chemother. 2017 04; 61(4).
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Ranjit DK, Jorgenson MA, Young KD. PBP1B Glycosyltransferase and Transpeptidase Activities Play Different Essential Roles during the De Novo Regeneration of Rod Morphology in Escherichia coli. J Bacteriol. 2017 04 01; 199(7).
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Jorgenson MA, Young KD. Interrupting Biosynthesis of O Antigen or the Lipopolysaccharide Core Produces Morphological Defects in Escherichia coli by Sequestering Undecaprenyl Phosphate. J Bacteriol. 2016 11 15; 198(22):3070-3079.
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Meagher M, Enemark EJ. Structure of a double hexamer of the Pyrococcus furiosus minichromosome maintenance protein N-terminal domain. Acta Crystallogr F Struct Biol Commun. 2016 07; 72(Pt 7):545-51.
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Peters K, Kannan S, Rao VA, Biboy J, Vollmer D, Erickson SW, Lewis RJ, Young KD, Vollmer W. The Redundancy of Peptidoglycan Carboxypeptidases Ensures Robust Cell Shape Maintenance in Escherichia coli. mBio. 2016 06 21; 7(3).
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Culbertson AT, Chou YH, Smith AL, Young ZT, Tietze AA, Cottaz S, Faur? R, Zabotina OA. Enzymatic Activity of Xyloglucan Xylosyltransferase 5. Plant Physiol. 2016 07; 171(3):1893-904.
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Ranjit DK, Young KD. Colanic Acid Intermediates Prevent De Novo Shape Recovery of Escherichia coli Spheroplasts, Calling into Question Biological Roles Previously Attributed to Colanic Acid. J Bacteriol. 2016 Apr; 198(8):1230-40.
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Yu C, Tan HY, Choi M, Stanenas AJ, Byrd AK, D Raney K, Cohan CS, Bianco PR. SSB binds to the RecG and PriA helicases in?vivo in the absence of DNA. Genes Cells. 2016 Feb; 21(2):163-84.
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Jorgenson MA, Kannan S, Laubacher ME, Young KD. Dead-end intermediates in the enterobacterial common antigen pathway induce morphological defects in Escherichia coli by competing for undecaprenyl phosphate. Mol Microbiol. 2016 Apr; 100(1):1-14.
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Yahashiri A, Jorgenson MA, Weiss DS. Bacterial SPOR domains are recruited to septal peptidoglycan by binding to glycan strands that lack stem peptides. Proc Natl Acad Sci U S A. 2015 Sep 08; 112(36):11347-52.
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Cai W, Goswami A, Yang Z, Liu X, Green KD, Barnard-Britson S, Baba S, Funabashi M, Nonaka K, Sunkara M, Morris AJ, Spork AP, Ducho C, Garneau-Tsodikova S, Thorson JS, Van Lanen SG. The Biosynthesis of Capuramycin-type Antibiotics: IDENTIFICATION OF THE A-102395 BIOSYNTHETIC GENE CLUSTER, MECHANISM OF SELF-RESISTANCE, AND FORMATION OF URIDINE-5'-CARBOXAMIDE. J Biol Chem. 2015 May 29; 290(22):13710-24.
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Beatson SA, Ben Zakour NL, Totsika M, Forde BM, Watts RE, Mabbett AN, Szubert JM, Sarkar S, Phan MD, Peters KM, Petty NK, Alikhan NF, Sullivan MJ, Gawthorne JA, Stanton-Cook M, Nhu NT, Chong TM, Yin WF, Chan KG, Hancock V, Ussery DW, Ulett GC, Schembri MA. Molecular analysis of asymptomatic bacteriuria Escherichia coli strain VR50 reveals adaptation to the urinary tract by gene acquisition. Infect Immun. 2015 May; 83(5):1749-64.
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Li G, Young KD. A new suite of tnaA mutants suggests that Escherichia coli tryptophanase is regulated by intracellular sequestration and by occlusion of its active site. BMC Microbiol. 2015 Feb 04; 15:14.
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