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Search Results to Se-Ran Jun

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Jun, Se-Ran

One or more keywords matched the following properties of Jun, Se-Ran

Property	Value
keywords	Genomic Epidemiology
keywords	Microbiome Epidemiology
keywords	Infection Control and Antibiotic Stewardship
keywords	Genomic and Microbiome Pathogen Surveillance (Antibiotic Resistome)
overview	My research interests are genomic and microbiome epidemiology at the intersection of next generation sequencing and systems biology for understanding pathogenesis of infectious disease and the role of human microbiome in health and disease. I have particular interests on genomic epidemiology of antimicrobial resistance and microbiome-targeted intervention for cancer infection and cancer therapy. Using Oxford Nanopore Technology, my research laboratory has focused on real-time genomic surveillance of antimicrobial resistance for infection control and antibiotic stewardship for immunocompromised cancer patients dealing with big data, EHR data, machine learning, visualization, and further multiomics integration.
research overview	Genomic Surveillance of Antimicrobial Resistance Microbiome Science MultiOmics Integration

One or more keywords matched the following items that are connected to Jun, Se-Ran

Item Type	Name
Concept	Host-Pathogen Interactions
Concept	Genomics
Concept	Metagenome
Concept	Comparative Genomic Hybridization
Academic Article	Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis.
Academic Article	Ebolavirus comparative genomics.
Academic Article	Insights from 20 years of bacterial genome sequencing.
Academic Article	Quality scores for 32,000 genomes.
Academic Article	Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104.
Academic Article	Whole-genome phylogeny of mammals: evolutionary information in genic and nongenic regions.
Academic Article	PanFP: pangenome-based functional profiles for microbial communities.
Academic Article	Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer.
Academic Article	Insights from comparative genomics of the Genus Salmonella
Academic Article	Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us?
Academic Article	Abiotic Stresses Shift Belowground Populus-Associated Bacteria Toward a Core Stress Microbiome.
Academic Article	Sample storage conditions induce post-collection biases in microbiome profiles.
Grant	Genome-based mumps surveillance system using third generation sequencing technology
Academic Article	Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.
Academic Article	Comparative genomics of hepatitis A virus, hepatitis C virus, and hepatitis E virus provides insights into the evolutionary history of Hepatovirus species.
Grant	Using genomics to track carbapenem-resistant Enterobacteriaceae linking rural and urban health in Arkansas
Academic Article	Effects of Housing Types on Cecal Microbiota of Two Different Strains of Laying Hens During the Late Production Phase.
Academic Article	Multi-Omic Analysis Reveals Different Effects of Sulforaphane on the Microbiome and Metabolome in Old Compared to Young Mice.
Academic Article	AACR Annual Meeting
Grant	Real-Time High Resolution Method for Genomic Surveillance of ESKAPE pathogens
Grant	Cefiderocol heteroresistance and resistance in carbapenem-resistant pathogens
Academic Article	Pseudomonas aeruginosa: biology, pathogenesis and control strategies. Edited by Alain Filloux and Juan-Luis Ramos. Springer Nature
Academic Article	Insertion sequences and other mobile elements associated with antibiotic resistance genes in Enterococcus isolates from an inpatient with prolonged bacteraemia.

Search Criteria

Genomic
Microbiome
Pathogen
Surveillance
Antibiotic
Resistome