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Galina Glazko

TitleAssociate Professor
InstitutionUniversity of Arkansas for Medical Sciences
DepartmentBiomedical Informatics, College of Medicine
Address468 Stephens Spine Center
501 Jack Stephens Drive
Mail Slot # 782
Little Rock AR 72205
Phone501-603-1759
ORCID ORCID Icon0000-0002-0570-5304 Additional info
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    Collapse Research 
    Collapse research activities and funding
    R01GM081766     (WAHLS, WAYNE P)Aug 10, 2007 - May 31, 2020
    NIH
    Biochemistry of recombination in meiosis
    Role: Co-Investigator

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    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions. Don't see publications published under other names? Login to add alternative names.
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    1. Rahmatallah Y, Glazko G. Improving data interpretability with new differential sample variance gene set tests. BMC Bioinformatics. 2025 Apr 14; 26(1):103. PMID: 40229677.
      View in: PubMed
    2. Degon Z, Dixon S, Rahmatallah Y, Galloway M, Gulutzo S, Price H, Cook J, Glazko G, Mukherjee A. Azospirillum brasilense improves rice growth under salt stress by regulating the expression of key genes involved in salt stress response, abscisic acid signaling, and nutrient transport, among others. Front Agron. 2023; 5. PMID: 38223701.
      View in: PubMed
    3. Wiggins G, Thomas J, Rahmatallah Y, Deen C, Haynes A, Degon Z, Glazko G, Mukherjee A. Common gene expression patterns are observed in rice roots during associations with plant growth-promoting bacteria, Herbaspirillum seropedicae and Azospirillum brasilense. Sci Rep. 2022 05 25; 12(1):8827. PMID: 35614083.
      View in: PubMed
    4. Rosa F, Zybailov BL, Glazko GV, Rahmatallah Y, Byrum S, Mackintosh SG, Bowlin AK, Yeruva L. Milk Formula Diet Alters Bacterial and Host Protein Profile in Comparison to Human Milk Diet in Neonatal Piglet Model. Nutrients. 2021 Oct 22; 13(11). PMID: 34835974.
      View in: PubMed
    5. Manjang K, Tripathi S, Yli-Harja O, Dehmer M, Glazko G, Emmert-Streib F. Prognostic gene expression signatures of breast cancer are lacking a sensible biological meaning. Sci Rep. 2021 01 08; 11(1):156. PMID: 33420139.
      View in: PubMed
    6. Kosovsky GY, Glazko VI, Glazko GV, Zybaylov BL, Glazko TT. Leukocytosis and Expression of Bovine Leukemia Virus microRNAs in Cattle. Front Vet Sci. 2020; 7:272. PMID: 32582774.
      View in: PubMed
    7. Smolander J, Stupnikov A, Glazko G, Dehmer M, Emmert-Streib F. Comparing biological information contained in mRNA and non-coding RNAs for classification of lung cancer patients. BMC Cancer. 2019 Dec 03; 19(1):1176. PMID: 31796020.
      View in: PubMed
    8. Rogozin IB, Roche-Lima A, Lada AG, Belinky F, Sidorenko IA, Glazko GV, Babenko VN, Cooper DN, Pavlov YI. Nucleotide Weight Matrices Reveal Ubiquitous Mutational Footprints of AID/APOBEC Deaminases in Human Cancer Genomes. Cancers (Basel). 2019 Feb 12; 11(2). PMID: 30759888.
      View in: PubMed
    9. Zybailov BL, Glazko GV, Rahmatallah Y, Andreyev DS, McElroy T, Karaduta O, Byrum SD, Orr L, Tackett AJ, Mackintosh SG, Edmondson RD, Kieffer DA, Martin RJ, Adams SH, Vaziri ND, Arthur JM. Metaproteomics reveals potential mechanisms by which dietary resistant starch supplementation attenuates chronic kidney disease progression in rats. PLoS One. 2019; 14(1):e0199274. PMID: 30699108.
      View in: PubMed
    10. Musa A, Ghoraie LS, Zhang SD, Glazko G, Yli-Harja O, Dehmer M, Haibe-Kains B, Emmert-Streib F. A review of connectivity map and computational approaches in pharmacogenomics. Brief Bioinform. 2018 05 01; 19(3):506-523. PMID: 28069634.
      View in: PubMed
    11. Sonderman KA, Wolf LL, Armstrong LB, Taylor K, Jiang W, Weil BR, Koehlmoos TP, Ricca RL, Weldon CB, Haider AH, Rice-Townsend SE. Testicular atrophy following inguinal hernia repair in children. Pediatr Surg Int. 2018 May; 34(5):553-560. PMID: 31120967.
      View in: PubMed
    12. Sonderman KA, Wolf LL, Armstrong LB, Taylor K, Jiang W, Weil BR, Koehlmoos TP, Ricca RL, Weldon CB, Haider AH, Rice-Townsend SE. Testicular atrophy following inguinal hernia repair in children. Pediatr Surg Int. 2018 May; 34(5):553-560. PMID: 31437237.
      View in: PubMed
    13. Sonderman KA, Wolf LL, Armstrong LB, Taylor K, Jiang W, Weil BR, Koehlmoos TP, Ricca RL, Weldon CB, Haider AH, Rice-Townsend SE. Testicular atrophy following inguinal hernia repair in children. Pediatr Surg Int. 2018 May; 34(5):553-560. PMID: 33038060.
      View in: PubMed
    14. Sonderman KA, Wolf LL, Armstrong LB, Taylor K, Jiang W, Weil BR, Koehlmoos TP, Ricca RL, Weldon CB, Haider AH, Rice-Townsend SE. Testicular atrophy following inguinal hernia repair in children. Pediatr Surg Int. 2018 May; 34(5):553-560. PMID: 37430204.
      View in: PubMed
    15. Sonderman KA, Wolf LL, Armstrong LB, Taylor K, Jiang W, Weil BR, Koehlmoos TP, Ricca RL, Weldon CB, Haider AH, Rice-Townsend SE. Testicular atrophy following inguinal hernia repair in children. Pediatr Surg Int. 2018 May; 34(5):553-560. PMID: 15846083.
      View in: PubMed
    16. Sonderman KA, Wolf LL, Armstrong LB, Taylor K, Jiang W, Weil BR, Koehlmoos TP, Ricca RL, Weldon CB, Haider AH, Rice-Townsend SE. Testicular atrophy following inguinal hernia repair in children. Pediatr Surg Int. 2018 May; 34(5):553-560. PMID: 16373579.
      View in: PubMed
    17. Sonderman KA, Wolf LL, Armstrong LB, Taylor K, Jiang W, Weil BR, Koehlmoos TP, Ricca RL, Weldon CB, Haider AH, Rice-Townsend SE. Testicular atrophy following inguinal hernia repair in children. Pediatr Surg Int. 2018 May; 34(5):553-560. PMID: 22822426.
      View in: PubMed
    18. Rahmatallah Y, Khaidakov M, Lai KK, Goyne HE, Lamps LW, Hagedorn CH, Glazko G. Platform-independent gene expression signature differentiates sessile serrated adenomas/polyps and hyperplastic polyps of the colon. BMC Med Genomics. 2017 12 28; 10(1):81. PMID: 29284484.
      View in: PubMed
    19. MacNicol MC, Cragle CE, McDaniel FK, Hardy LL, Wang Y, Arumugam K, Rahmatallah Y, Glazko GV, Wilczynska A, Childs GV, Zhou D, MacNicol AM. Evasion of regulatory phosphorylation by an alternatively spliced isoform of Musashi2. Sci Rep. 2017 09 14; 7(1):11503. PMID: 28912529.
      View in: PubMed
    20. Musa A, Ghoraie LS, Zhang SD, Glazko G, Yli-Harja O, Dehmer M, Haibe-Kains B, Emmert-Streib F. A review of connectivity map and computational approaches in pharmacogenomics. Brief Bioinform. 2017 09 01; 18(5):903. PMID: 28334173.
      View in: PubMed
    21. Oliveira C, Gunderman L, Coles CA, Lochmann J, Parks M, Ballard E, Glazko G, Rahmatallah Y, Tackett AJ, Thomas DJ. 16S rRNA Gene-Based Metagenomic Analysis of Ozark Cave Bacteria. Diversity (Basel). 2017 Sep; 9(3). PMID: 29551950.
      View in: PubMed
    22. Glazko G, Rahmatallah Y, Zybailov B, Emmert-Streib F. Extracting the Strongest Signals from Omics Data: Differentially Expressed Pathways and Beyond. Methods Mol Biol. 2017; 1613:125-159. PMID: 28849561.
      View in: PubMed
    23. Chernikova D, Managadze D, Glazko GV, Makalowski W, Rogozin IB. Conservation of the Exon-Intron Structure of Long Intergenic Non-Coding RNA Genes in Eutherian Mammals. Life (Basel). 2016 Jul 15; 6(3). PMID: 27429005.
      View in: PubMed
    24. Stupnikov A, Tripathi S, de Matos Simoes R, McArt D, Salto-Tellez M, Glazko G, Dehmer M, Emmert-Streib F. samExploreR: exploring reproducibility and robustness of RNA-seq results based on SAM files. Bioinformatics. 2016 11 01; 32(21):3345-3347. PMID: 27402900.
      View in: PubMed
    25. Zybailov B, Gokulan K, Wiese J, Ramanagoudr-Bhojappa R, Byrd AK, Glazko G, Jaiswal M, Mackintosh S, Varughese KI, Raney KD. Analysis of Protein-protein Interaction Interface between Yeast Mitochondrial Proteins Rim1 and Pif1 Using Chemical Cross-linking Mass Spectrometry. J Proteomics Bioinform. 2015 Nov; 8(11):243-252. PMID: 26807012.
      View in: PubMed
    26. Rahmatallah Y, Emmert-Streib F, Glazko G. Gene set analysis approaches for RNA-seq data: performance evaluation and application guideline. Brief Bioinform. 2016 05; 17(3):393-407. PMID: 26342128.
      View in: PubMed
    27. Stupnikov A, Glazko GV, Emmert-Streib F. Effects of subsampling on characteristics of RNA-seq data from triple-negative breast cancer patients. Chin J Cancer. 2015 Aug 08; 34(10):427-38. PMID: 26253000.
      View in: PubMed
    28. Rahmatallah Y, Emmert-Streib F, Glazko G. Comparative evaluation of gene set analysis approaches for RNA-Seq data. BMC Bioinformatics. 2014 Dec 05; 15:397. PMID: 25475910.
      View in: PubMed
    29. Emmert-Streib F, de Matos Simoes R, Glazko G, McDade S, Haibe-Kains B, Holzinger A, Dehmer M, Campbell F. Functional and genetic analysis of the colon cancer network. BMC Bioinformatics. 2014; 15 Suppl 6:S6. PMID: 25079297.
      View in: PubMed
    30. Rahmatallah Y, Emmert-Streib F, Glazko G. Gene Sets Net Correlations Analysis (GSNCA): a multivariate differential coexpression test for gene sets. Bioinformatics. 2014 Feb 01; 30(3):360-8. PMID: 24292935.
      View in: PubMed
    31. Gao J, Wagnon JL, Protacio RM, Glazko GV, Beggs M, Raj V, Davidson MK, Wahls WP. A stress-activated, p38 mitogen-activated protein kinase-ATF/CREB pathway regulates posttranscriptional, sequence-dependent decay of target RNAs. Mol Cell Biol. 2013 Aug; 33(15):3026-35. PMID: 23732911.
      View in: PubMed
    32. Tripathi S, Glazko GV, Emmert-Streib F. Ensuring the statistical soundness of competitive gene set approaches: gene filtering and genome-scale coverage are essential. Nucleic Acids Res. 2013 Apr; 41(7):e82. PMID: 23389952.
      View in: PubMed
    33. Smolock EM, Korshunov VA, Glazko G, Qiu X, Gerloff J, Berk BC. Ribosomal protein L17, RpL17, is an inhibitor of vascular smooth muscle growth and carotid intima formation. Circulation. 2012 Nov 13; 126(20):2418-27. PMID: 23065385.
      View in: PubMed
    34. Glazko GV, Zybailov BL, Rogozin IB. Computational prediction of polycomb-associated long non-coding RNAs. PLoS One. 2012; 7(9):e44878. PMID: 23028655.
      View in: PubMed
    35. Yampolsky LY, Glazko GV, Fry JD. Evolution of gene expression and expression plasticity in long-term experimental populations of Drosophila melanogaster maintained under constant and variable ethanol stress. Mol Ecol. 2012 Sep; 21(17):4287-99. PMID: 22774776.
      View in: PubMed
    36. Emmert-Streib F, Glazko GV, Altay G, de Matos Simoes R. Statistical inference and reverse engineering of gene regulatory networks from observational expression data. Front Genet. 2012; 3:8. PMID: 22408642.
      View in: PubMed
    37. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 15128446.
      View in: PubMed
    38. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 21637797.
      View in: PubMed
    39. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 17437735.
      View in: PubMed
    40. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 27090004.
      View in: PubMed
    41. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 25045217.
      View in: PubMed
    42. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 28118818.
      View in: PubMed
    43. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 30213953.
      View in: PubMed
    44. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 39315246.
      View in: PubMed
    45. McGoogan KE, Haafiz AB, Gonz?lez Peralta RP. Herpes simplex virus hepatitis in infants: clinical outcomes and correlates of disease severity. J Pediatr. 2011 Oct; 159(4):608-11. PMID: 40370818.
      View in: PubMed
    46. Emmert-Streib F, Glazko GV. Network biology: a direct approach to study biological function. Wiley Interdiscip Rev Syst Biol Med. 2011 Jul-Aug; 3(4):379-91. PMID: 21197659.
      View in: PubMed
    47. Glazko G, Mushegian A. Measuring gene expression divergence: the distance to keep. Biol Direct. 2010 Aug 06; 5:51. PMID: 20691088.
      View in: PubMed
    48. Hu R, Qiu X, Glazko G. A new gene selection procedure based on the covariance distance. Bioinformatics. 2010 Feb 01; 26(3):348-54. PMID: 19996162.
      View in: PubMed
    49. Glazko GV, Emmert-Streib F. Unite and conquer: univariate and multivariate approaches for finding differentially expressed gene sets. Bioinformatics. 2009 Sep 15; 25(18):2348-54. PMID: 19574285.
      View in: PubMed
    50. Gordon A, Chen L, Glazko G, Yakovlev A. Balancing Type One and Two Errors in Multiple Testing for Differential Expression of Genes. Comput Stat Data Anal. 2009 Mar 15; 53(5):1622-1629. PMID: 20161303.
      View in: PubMed
    51. Gordon A, Chen L, Glazko G, Yakovlev A. Balancing Type One and Two Errors in Multiple Testing for Differential Expression of Genes. Comput Stat Data Anal. 2009; 53(5):1622-1629.
    52. Hu R, Qiu X, Glazko G, Klebanov L, Yakovlev A. Detecting intergene correlation changes in microarray analysis: a new approach to gene selection. BMC Bioinformatics. 2009 Jan 15; 10:20. PMID: 19146700.
      View in: PubMed
    53. Hanin L, Awadalla SS, Cox P, Glazko G, Yakovlev A. Chromosome-specific spatial periodicities in gene expression revealed by spectral analysis. J Theor Biol. 2009 Feb 07; 256(3):333-42. PMID: 19014953.
      View in: PubMed
    54. Minakhin L, Goel M, Berdygulova Z, Ramanculov E, Florens L, Glazko G, Karamychev VN, Slesarev AI, Kozyavkin SA, Khromov I, Ackermann HW, Washburn M, Mushegian A, Severinov K. Genome comparison and proteomic characterization of Thermus thermophilus bacteriophages P23-45 and P74-26: siphoviruses with triplex-forming sequences and the longest known tails. J Mol Biol. 2008 Apr 25; 378(2):468-80. PMID: 18355836.
      View in: PubMed
    55. Glazko G, Makarenkov V, Liu J, Mushegian A. Evolutionary history of bacteriophages with double-stranded DNA genomes. Biol Direct. 2007 Dec 06; 2:36. PMID: 18062816.
      View in: PubMed
    56. Klebanov L, Glazko G, Salzman P, Yakovlev A, Xiao Y. A multivariate extension of the gene set enrichment analysis. J Bioinform Comput Biol. 2007 Oct; 5(5):1139-53. PMID: 17933015.
      View in: PubMed
    57. Rogozin IB, Iyer LM, Liang L, Glazko GV, Liston VG, Pavlov YI, Aravind L, Pancer Z. Evolution and diversification of lamprey antigen receptors: evidence for involvement of an AID-APOBEC family cytosine deaminase. Nat Immunol. 2007 Jun; 8(6):647-56. PMID: 17468760.
      View in: PubMed
    58. Jaspersen SL, Martin AE, Glazko G, Giddings TH, Morgan G, Mushegian A, Winey M. The Sad1-UNC-84 homology domain in Mps3 interacts with Mps2 to connect the spindle pole body with the nuclear envelope. J Cell Biol. 2006 Aug 28; 174(5):665-75. PMID: 16923827.
      View in: PubMed
    59. Glazko G, Coleman M, Mushegian A. Similarity searches in genome-wide numerical data sets. Biol Direct. 2006 May 30; 1:13. PMID: 16734895.
      View in: PubMed
    60. Liu J, Glazko G, Mushegian A. Protein repertoire of double-stranded DNA bacteriophages. Virus Res. 2006 Apr; 117(1):68-80. PMID: 16490276.
      View in: PubMed
    61. Glazko GV, Babenko VN, Koonin EV, Rogozin IB. Mutational hotspots in the TP53 gene and, possibly, other tumor suppressors evolve by positive selection. Biol Direct. 2006 Jan 31; 1:4. PMID: 16542006.
      View in: PubMed
    62. Glazko G, Gordon A, Mushegian A. The choice of optimal distance measure in genome-wide datasets. Bioinformatics. 2005 Nov 01; 21 Suppl 3:iii3-11. PMID: 16306389.
      View in: PubMed
    63. Glazko G, Veeramachaneni V, Nei M, Makalowski W. Eighty percent of proteins are different between humans and chimpanzees. Gene. 2005 Feb 14; 346:215-9. PMID: 15716009.
      View in: PubMed
    64. Glazko GV, Koonin EV, Rogozin IB. Molecular dating: ape bones agree with chicken entrails. Trends Genet. 2005 Feb; 21(2):89-92. PMID: 15661354.
      View in: PubMed
    65. Glazko GV, Koonin EV, Rogozin IB. Mutation hotspots in the p53 gene in tumors of different origin: correlation with evolutionary conservation and signs of positive selection. Biochim Biophys Acta. 2004 Aug 12; 1679(2):95-106. PMID: 15297143.
      View in: PubMed
    66. Glazko GV, Nei M. Estimation of divergence times for major lineages of primate species. Mol Biol Evol. 2003 Mar; 20(3):424-34. PMID: 12644563.
      View in: PubMed
    67. Glazko GV, Koonin EV, Rogozin IB, Shabalina SA. A significant fraction of conserved noncoding DNA in human and mouse consists of predicted matrix attachment regions. Trends Genet. 2003 Mar; 19(3):119-24. PMID: 12615002.
      View in: PubMed
    68. Jordan IK, Rogozin IB, Glazko GV, Koonin EV. Origin of a substantial fraction of human regulatory sequences from transposable elements. Trends Genet. 2003 Feb; 19(2):68-72. PMID: 12547512.
      View in: PubMed
    69. Suzuki Y, Glazko GV, Nei M. Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics. Proc Natl Acad Sci U S A. 2002 Dec 10; 99(25):16138-43. PMID: 12451182.
      View in: PubMed
    70. Glazko GB, Milanesi L, Rogozin IB. The subclass approach for mutational spectrum analysis: application of the SEM algorithm. J Theor Biol. 1998; 192(4):475-87.
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