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Search Results to David Ussery

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One or more keywords matched the following items that are connected to Ussery, David

Item TypeName
Concept Genome, Protozoan
Concept Genome Size
Concept Genome, Archaeal
Concept Genome, Human
Concept Genome, Bacterial
Concept Genome, Viral
Concept Genome, Fungal
Concept Genome
Academic Article A closer look at bacteroides: phylogenetic relationship and genomic implications of a life in the human gut.
Academic Article Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis.
Academic Article Ebolavirus comparative genomics.
Academic Article Insights from 20 years of bacterial genome sequencing.
Academic Article Genome update: prediction of secreted proteins in 225 bacterial proteomes.
Academic Article Estimating variation within the genes and inferring the phylogeny of 186 sequenced diverse Escherichia coli genomes.
Academic Article Genome update: rRNAs in sequenced microbial genomes.
Academic Article Analysis and prediction of gene splice sites in four Aspergillus genomes.
Academic Article Quality scores for 32,000 genomes.
Academic Article Non-O1 Vibrio cholerae unlinked to cholera in Haiti.
Academic Article Two novel methods for using genome sequences to infer taxonomy.
Academic Article Bias of purine stretches in sequenced chromosomes.
Academic Article Bayesian prediction of bacterial growth temperature range based on genome sequences.
Academic Article Genome sequencing identifies two nearly unchanged strains of persistent Listeria monocytogenes isolated at two different fish processing plants sampled 6 years apart.
Academic Article Genome update: correlation of bacterial genomic properties.
Academic Article Genomic analysis of two-component signal transduction proteins in basidiomycetes.
Academic Article Chromatin architecture and gene expression in Escherichia coli.
Academic Article LeuO is a global regulator of gene expression in Salmonella enterica serovar Typhimurium.
Academic Article Pan-genome analysis of human gastric pathogen H. pylori: comparative genomics and pathogenomics approaches to identify regions associated with pathogenicity and prediction of potential core therapeutic targets.
Academic Article Identification of putative noncoding RNA genes in the Burkholderia cenocepacia J2315 genome.
Academic Article Genome update: prediction of membrane proteins in prokaryotic genomes.
Academic Article Genome comparison of bacterial pathogens.
Academic Article Genome update: purine strand bias in 280 bacterial genomes.
Academic Article The genomic code: inferring Vibrionaceae niche specialization.
Academic Article The minimum information about a genome sequence (MIGS) specification.
Academic Article Campylobacter fetus subspecies: comparative genomics and prediction of potential virulence targets.
Academic Article Molecular analysis of asymptomatic bacteriuria Escherichia coli strain VR50 reveals adaptation to the urinary tract by gene acquisition.
Academic Article Genome update: tRNAs in sequenced microbial genomes.
Academic Article Genome Update: annotation quality in sequenced microbial genomes.
Academic Article Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes.
Academic Article Microbial comparative pan-genomics using binomial mixture models.
Academic Article On the origins of a Vibrio species.
Academic Article Genomic taxonomy of Vibrios.
Academic Article Computational genomics-proteomics and Phylogeny analysis of twenty one mycobacterial genomes (Tuberculosis & non Tuberculosis strains).
Academic Article The complete genome sequence and analysis of the epsilonproteobacterium Arcobacter butzleri.
Academic Article Multilocus sequence typing of total-genome-sequenced bacteria.
Academic Article Analysis of genomic signatures in prokaryotes using multinomial regression and hierarchical clustering.
Academic Article Comparison of 61 sequenced Escherichia coli genomes.
Academic Article Prediction of highly expressed genes in microbes based on chromatin accessibility.
Academic Article The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571.
Academic Article Stretches of alternating pyrimidine/purines and purines are respectively linked with pathogenicity and growth temperature in prokaryotes.
Academic Article An environmental signature for 323 microbial genomes based on codon adaptation indices.
Academic Article Is the pan-genome also a pan-selectome?
Academic Article CBS Genome Atlas Database: a dynamic storage for bioinformatic results and sequence data.
Academic Article Functionality of system components: conservation of protein function in protein feature space.
Academic Article Genome update: 2D clustering of bacterial genomes.
Academic Article RNAmmer: consistent and rapid annotation of ribosomal RNA genes.
Academic Article Comparison of protein coding gene contents of the fungal phyla Pezizomycotina and Saccharomycotina.
Academic Article Genomic comparisons of Brucella spp. and closely related bacteria using base compositional and proteome based methods.
Academic Article Genome Update: AT content in sequenced prokaryotic genomes.
Academic Article Genome update: base skews in 200+ bacterial chromosomes.
Academic Article Genome Update: Protein secretion systems in 225 bacterial genomes.
Academic Article The genus burkholderia: analysis of 56 genomic sequences.
Academic Article Amino acid usage is asymmetrically biased in AT- and GC-rich microbial genomes.
Academic Article Comparative genomic analysis of two-component regulatory proteins in Pseudomonas syringae.
Academic Article Extracytoplasmic function sigma factors in Pseudomonas syringae.
Academic Article Differences in two-component signal transduction proteins among the genus Brucella: implications for host preference and pathogenesis.
Academic Article Inheritance and organisation of the mitochondrial genome differ between two Saccharomyces yeasts.
Academic Article The plasmid genome database.
Academic Article Genome update: DNA repeats in bacterial genomes.
Academic Article Polyclonality of concurrent natural populations of Alteromonas macleodii.
Academic Article From essential to persistent genes: a functional approach to constructing synthetic life.
Academic Article Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88.
Academic Article Analysis of two large functionally uncharacterized regions in the Methanopyrus kandleri AV19 genome.
Academic Article The Salmonella enterica pan-genome.
Academic Article Genome update: Length distributions of sequenced prokaryotic genomes.
Academic Article Genome Update: proteome comparisons.
Academic Article Genome update: distribution of two-component transduction systems in 250 bacterial genomes.
Academic Article Ten years of bacterial genome sequencing: comparative-genomics-based discoveries.
Academic Article Complete genome sequence of the commensal Enterococcus faecalis 62, isolated from a healthy Norwegian infant.
Academic Article Leaner and meaner genomes in Escherichia coli.
Academic Article Design of a seven-genome Escherichia coli microarray for comparative genomic profiling.
Academic Article Comparative genomics of Bifidobacterium, Lactobacillus and related probiotic genera.
Academic Article Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes.
Academic Article Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104.
Academic Article Molecular analysis of the emergence of pandemic Vibrio parahaemolyticus.
Academic Article Transcriptomics and adaptive genomics of the asymptomatic bacteriuria Escherichia coli strain 83972.
Academic Article The genome BLASTatlas-a GeneWiz extension for visualization of whole-genome homology.
Academic Article Genomic characterization of Campylobacter jejuni strain M1.
Academic Article Genome update: 161 prokaryotic genomes sequenced, and counting.
Academic Article Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray.
Academic Article Genome update: alignment of bacterial chromosomes.
Academic Article Genome update: promoter profiles.
Academic Article Genome update: chromosome atlases.
Academic Article Analysis of intra-genomic GC content homogeneity within prokaryotes.
Academic Article Sigma factors in a thousand E. coli genomes.
Academic Article Global features of the Alcanivorax borkumensis SK2 genome.
Academic Article Defining the Pseudomonas genus: where do we draw the line with Azotobacter?
Academic Article Genome update: sigma factors in 240 bacterial genomes.
Academic Article Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer.
Academic Article Genome update: the 1000th genome--a cautionary tale.
Academic Article The 2008 update of the Aspergillus nidulans genome annotation: a community effort.
Academic Article Genome Sequence of Campylobacter jejuni strain 327, a strain isolated from a turkey slaughterhouse.
Academic Article Genome sequences of two stress-tolerant Campylobacter jejuni poultry strains, 305 and DFVF1099.
Academic Article Unique and conserved genome regions in Vibrio harveyi and related species in comparison with the shrimp pathogen Vibrio harveyi CAIM 1792.
Academic Article Three Complete Genome Sequences of Genotype G Mumps Virus from the 2016 Outbreak in Arkansas, USA.
Academic Article Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us?
Academic Article Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D.
Academic Article dBBQs: dataBase of Bacterial Quality scores.
Academic Article Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes.
Academic Article Genome Sequences of Zika Virus Strains Recovered from Amniotic Fluid, Placenta, and Fetal Brain of a Microcephaly Patient in Thailand, 2017.
Academic Article Toward unrestricted use of public genomic data.
Academic Article Complete Genome and Plasmid Sequences of Escherichia coli Type Strain ATCC 11775.
Academic Article Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection.
Academic Article Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016.
Academic Article Comparative genomics of hepatitis A virus, hepatitis C virus, and hepatitis E virus provides insights into the evolutionary history of Hepatovirus species.
Academic Article Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia.
Academic Article Two SARS-CoV-2 Genome Sequences of Isolates from Rural U.S. Patients Harboring the D614G Mutation, Obtained Using Nanopore Sequencing.
Academic Article Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups.

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