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Search Results to Stephanie Byrum

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One or more keywords matched the following properties of Byrum, Stephanie

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overview My research focus involves a translational approach for the identification of cancer systems biology, from the bench to the bedside. I have performed experiments ranging from collecting patient samples, to performing proteomic and genomic analyses, using bioinformatics to mine large complex data sets, and identify important clinical markers for metastatic breast cancer and melanoma. I have formal training in bioinformatics and mass spectrometry. My bioinformatics skill set includes: proteomics (label-free, stable isotope tags, SILAC, TMT-labeling, intensity-based analysis), epigenetics (quantitation of histone posttranslational modifications and chromatin remodelers), genomics (microarray, ChIP-seq, RNA-seq), metagenomics, biostatistics and data mining, and pathway and functional analysis. My research is currently focused on developing multi-omics data integration and proteogenomics applications.

One or more keywords matched the following items that are connected to Byrum, Stephanie

Item TypeName
Academic Article Proteomic analysis of bone cancer: a review of current and future developments.
Academic Article The promise of bone cancer proteomics.
Academic Article A quantitative proteomic analysis of FFPE melanoma.
Academic Article Purification of a specific native genomic locus for proteomic analysis.
Concept Proteomics
Academic Article Bone Cancer: Progression and Therapeutic Approaches
Academic Article A PWWP domain-containing protein targets the NuA3 acetyltransferase complex via histone H3 lysine 36 trimethylation to coordinate transcriptional elongation at coding regions.
Academic Article Purification of specific chromatin loci for proteomic analysis.
Academic Article Quantitative Histone Mass Spectrometry Identifies Elevated Histone H3 Lysine 27 (Lys27) Trimethylation in Melanoma.
Academic Article Impact of sarA and Phenol-Soluble Modulins on the Pathogenesis of Osteomyelitis in Diverse Clinical Isolates of Staphylococcus aureus.
Academic Article A Quantitative Proteomic Analysis of Urine from Gamma-Irradiated Non-Human Primates.
Academic Article Proteomics-Based Identification of Differentially Abundant Proteins from Human Keratinocytes Exposed to Arsenic Trioxide.
Academic Article A Proteomic Study of Human Merkel Cell Carcinoma.
Academic Article Quantitative Proteomics Identifies Activation of Hallmark Pathways of Cancer in Patient Melanoma.
Academic Article Time- and radiation-dose dependent changes in the plasma proteome after total body irradiation of non-human primates: Implications for biomarker selection.
Academic Article Proteomic identification of histone post-translational modifications and proteins enriched at a DNA double-strand break.
Academic Article Vulvar squamous cell carcinoma aggressiveness is associated with differential expression of collagen and STAT1.
Academic Article Proteomic Changes in Mouse Spleen after Radiation-Induced Injury and its Modulation by Gamma-Tocotrienol.
Academic Article Impact of Spaceflight and Artificial Gravity on the Mouse Retina: Biochemical and Proteomic Analysis.
Academic Article Label-Free Proteomic Approach to Characterize Protease-Dependent and -Independent Effects of sarA Inactivation on the Staphylococcus aureus Exoproteome.
Academic Article Metaproteomics reveals potential mechanisms by which dietary resistant starch supplementation attenuates chronic kidney disease progression in rats.
Grant Technology for Identification of Epiproteomes in Tissue Samples
Academic Article Proteomic characterization of the arsenic response locus in S. cerevisiae.
Academic Article Characterization of mouse ocular response to a 35-day spaceflight mission: Evidence of blood-retinal barrier disruption and ocular adaptations.
Grant Q Exactive HF-X Hybrid Quadrupole Orbitrap Mass Spectrometer
Academic Article Exploiting Correlations between Protein Abundance and the Functional Status of saeRS and sarA To Identify Virulence Factors of Potential Importance in the Pathogenesis of Staphylococcus aureus Osteomyelitis.
Academic Article Assessing the Effects of Redox Modifier MnTnBuOE-2-PyP 5+ on Cognition and Hippocampal Physiology Following Doxorubicin, Cyclophosphamide, and Paclitaxel Treatment.
Academic Article Accurate and Sensitive Quantitation of the Dynamic Heat Shock Proteome Using Tandem Mass Tags.
Academic Article ProteoViz: a tool for the analysis and interactive visualization of phosphoproteomics data.
Grant IDeA National Resource for Quantitative Proteomics
Academic Article Cranial irradiation impairs juvenile social memory and modulates hippocampal physiology.
Academic Article Early Gestational Exposure to Inhaled Ozone Impairs Maternal Uterine Artery and Cardiac Function.
Academic Article Registered report protocol: Quantitative analysis of septin Cdc10-associated proteome in Cryptococcus neoformans.
Academic Article Multi-omics data integration considerations and study design for biological systems and disease.
Academic Article Multi-omics data integration reveals correlated regulatory features of triple negative breast cancer.
Academic Article Milk Formula Diet Alters Bacterial and Host Protein Profile in Comparison to Human Milk Diet in Neonatal Piglet Model.
Academic Article Proteomics Indicates Lactate Dehydrogenase Is Prognostic in Acetaminophen-Induced Acute Liver Failure Patients and Reveals Altered Signaling Pathways.
Academic Article Proteomic profiling of tear fluid as a promising non-invasive screening test for colon cancer.
Academic Article Neoplastic signatures: Comparative proteomics of canine hepatobiliary neuroendocrine tumors to normal niche tissue.
Academic Article CDK8 and CDK19: positive regulators of signal-induced transcription and negative regulators of Mediator complex proteins.
Academic Article Targeting mitochondria in the aged cerebral vasculature with SS-31, a proteomic study of brain microvessels.

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